Protein ZmMYBR5 | |
---|---|
Information | |
TF Name: | ZmMYBR5 |
Species: | Maize |
TF Family: | MYB-related |
Gene Name(Synonym): | MYBR5 |
Uniprot ID: | A0A1D6PDQ1 |
ZmMYBR5 is a protein in the MYB-related family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d006848 | DAPseq | sequence | fimo | position | |
Zm00001d006848 | DAPseq | sequence | fimo | position | |
Zm00001d006848 | ChIPseq | sequence | fimo | position | |
Zm00001d006848 | PChIPseq | sequence | fimo | position |
MNPLKPSMGAEKQMYGQPSGVRPFGVSLLIAGYDDNGPQLYQGSSQVVLIKLIPQDHTSPGRHQPWEKNVSNAKTFLGKR
YEGQISSNNIEIGIIRADREFKVLSPSEIKDFLEEVEFAVVHGFRGFAPLSVGSENQAEENPVPKEKRPKRLEWTKEDEE
KLVNAWFMHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNR
MNPLKPSMGAEKQMYGQPSGVRPFGVSLLIAGYDDNGPQLYQGSSQVVLIKLIPQDHTSPGRHQPWEKNVSNAKTFLGKR
YEGQISSNNIEIGIIRADREFKVLSPSEIKDFLEEVEFAVVHGFRGFAPLSVGSENQAEENPVPKEKRPKRLEWTKEDEE
KLVNAWFMHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNR
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
ATGAATCCTCTAAAACCGTCGATGG...
ATGAATCCTCTAAAACCGTCGATGGGAGCAGAGAAGCAGATGTACGGTCAGCCAAGTGGTGTAAGACCATTTGGAGTATCGCTGTTGATTGCTGGGTATGATGACAATGGCCCACAGTTGTATCAGGGATCATCACAAGTAGTACTTATAAAGTTGATCCCTCAGGATCATACTTCTCCTGGAAGGCATCAGCCATGGGAAAAAAATGTGTCAAATGCAAAGACATTTCTTGGAAAGAGATATGAGGGGCAAATTTCCTCCAACAACATTGAAATCGGAATTATTCGAGCTGACCGTGAGTTCAAAGTTCTAAGCCCATCAGAGATCAAGGATTTCTTGGAAGAGGTGGAATTTGCTGTAGTGCATGGATTTCGTGGCTTTGCACCTTTATCTGTTGGATCTGAAAACCAAGCTGAGGAAAATCCCGTGCCGAAGGAAAAGCGTCCAAAGAGGCTAGAGTGGACGAAGGAAGACGAGGAAAAGCTGGTTAATGCTTGGTTTATGCATTCTAATGATCCCATCTCCGGCAACAATAAGAGCGGATCAAGTTTCTGGGGCCAAATAGCGGCAACATATAACTCCACCTCCGACCCTATCCGTCATCGAACCGCCAAGCAACTTAAAGATCATTGGGTCACCTACAACCGGTAGGTGACCAAGTTCAATGGATTCTACCTCCAAGAAAAAAGGTTGCGTCAGAGCGGAGCTGACGATGCAATGGTCATGGATGCAGCAATGGCGAGGTTCGAGGGTAAAATGGGGCATCCATTTAAGCGCCATCATTGGTGGCAAGTTGTTCGCCACGAGCCCAAGTGGTCAGCAAAGCATGGTCTTGGTAGTGGATCTGATTCGACTGCGAATAAGAGAACCCGACTCGGAGTCTCTGGTGAATATAGTTCTGGAGGCACTGAAGACACCGAGGAGGAAGTGCCCCGACCAGTGGGGCGTGATAGGGCAAAGGCGGCTGCGCGAAAGACAAAGACGAAGGGGAAAGGGAAGGAAGCCACGAGCAGCGAATCAACAAGTGAAGCATTCAAAATGAAGAACTTGTGGGGTGGATTAGTGAAGGCCAAGCTTTTGAAGCAATGGAACATCCTAAAGGGCCGATCAACCAGAGATATGGACCCGGCTGAAAGACGTACCCATGGCAGGGCCGTAAAGATGGTCGAAAAAGAACTTGGTCTGCTAGATGACGAAGAAGAGGAACCGGAAGCGGAACGTGAAGAGGAGGAAGATGAGGATGAGATCGAGGAGTCCGATTAGAGTTATGTAATTTTATTTTAATT
MSGWSPDLNTFTDLLQSDGSPTTLPLDESSSLHRRSDVSASLPRALFPAARPPPYPYPYHLYQYPPSSYGQPPTSQAGIQ
ASFPVRPYAPPPPAADGSQASFQIPPYAPPSYAPPPYGVPPYAPYAPPPYGAPHPYAPPTYGAPPPVAPLSVGSENQAEE
NPVPKEKRPKRLEWTKEDEEKLVNAWFMHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNR
ATGTCGGGTTGGTCCCCAGATTTGA...
ATGTCGGGTTGGTCCCCAGATTTGAACACCTTCACGGATCTCTTGCAGTCCGATGGGTCACCTACAACCCTTCCGTTAGATGAGTCTTCTTCACTACATCGTCGCTCCGATGTTTCAGCCTCACTCCCCCGTGCACTATTTCCGGCTGCGCGTCCACCACCATACCCTTATCCCTATCATTTGTATCAATATCCACCGTCTTCATATGGTCAACCTCCAACTTCCCAAGCCGGAATTCAAGCCTCATTCCCGGTACGTCCGTATGCCCCTCCTCCACCTGCTGCGGACGGAAGTCAAGCTTCTTTCCAGATACCTCCATATGCCCCTCCTTCATATGCTCCACCTCCGTATGGAGTACCTCCTTATGCTCCATATGCTCCACCTCCGTATGGGGCACCTCATCCATATGCTCCACCTACGTATGGAGCACCTCCTCCAGTTGCACCTTTATCTGTTGGATCTGAAAACCAAGCTGAGGAAAATCCCGTGCCGAAGGAAAAGCGTCCAAAGAGGCTAGAGTGGACGAAGGAAGACGAGGAAAAGCTGGTTAATGCTTGGTTTATGCATTCTAATGATCCCATCTCCGGCAACAATAAGAGCGGATCAAGTTTCTGGGGCCAAATAGCGGCAACATATAACTCCACCTCCGACCCTATCCGTCATCGAACCGCCAAGCAACTTAAAGATCATTGGGTCACCTACAACCGGTAGGTGACCAAGTTCAATGGATTCTACCTCCAAGAAAAAAGGTTGCGTCAGAGCGGAGCTGACGATGCAATGGTCATGGATGCAGCAATGGCGAGGTTCGAGGGTAAAATGGGGCATCCATTTAAGCGCCATCATTGGTGGCAAGTTGTTCGCCACGAGCCCAAGTGGTCAGCAAAGCATGGTCTTGGTAGTGGATCTGATTCGACTGCGAATAAGAGAACCCGACTCGGAGTCTCTGGTGAATATAGTTCTGGAGGCACTGAAGACACCGAGGAGGAAGTGCCCCGACCAGTGGGGCGTGATAGGGCAAAGGCGGCTGCGCGAAAGACAAAGACGAAGGGGAAAGGGAAGGAAGCCACGAGCAGCGAATCAACAAGTGAAGCATTCAAAATGAAGAACTTGTGGGGTGGATTAGTGAAGGCCAAGCTTTTGAAGCAATGGAACATCCTAAAGGGCCGATCAACCAGAGATATGGACCCGGCTGAAAGACGTACCCATGGCAGGGCCGTAAAGATGGTCGAAAAAGAACTTGGTCTGCTAGATGACGAAGAAGAGGAACCGGAAGCGGAACGTGAAGAGGAGGAAGATGAGGATGAGATCGAGGAGTCCGATTAGAGTTATGTAATTTTATTTTAATTATCATGTCATTTTATTTTAATTATTATGTACTTTGTAATTTTTAATTCAATAAAAACTATTATGTTGTGT
MSGWSPDLNTFTDLLQSDGSPTTLPLDESSSLHRRSDVSASLPRALFPAARPPPYPYPYHLYQYPPSSYGQPPTSQAGIQ
ASFPVRPYAPPPPAADGSQASFQIPPYAPPSYAPPPYGVPPYAPYAPPPYGAPHPYAPPTYGAPPPVAPLSVGSENQAEE
NPVPKEKRPKRLEWTKEDEEKLVNAWFMHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNRLRQS
GADDAMVMDAAMARFEGKMGHPFKRHHWWQVVRHEPKWSAKHGLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPV
GRDRAKAAARKTKTKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQWNILKGRSTRDMDPAERRTHGRAVKMVEKELG
LLDDEEEEPEAEREEEEDEDEIEESD
ATGTCGGGTTGGTCCCCAGATTTGA...
ATGTCGGGTTGGTCCCCAGATTTGAACACCTTCACGGATCTCTTGCAGTCCGATGGGTCACCTACAACCCTTCCGTTAGATGAGTCTTCTTCACTACATCGTCGCTCCGATGTTTCAGCCTCACTCCCCCGTGCACTATTTCCGGCTGCGCGTCCACCACCATACCCTTATCCCTATCATTTGTATCAATATCCACCGTCTTCATATGGTCAACCTCCAACTTCCCAAGCCGGAATTCAAGCCTCATTCCCGGTACGTCCGTATGCCCCTCCTCCACCTGCTGCGGACGGAAGTCAAGCTTCTTTCCAGATACCTCCATATGCCCCTCCTTCATATGCTCCACCTCCGTATGGAGTACCTCCTTATGCTCCATATGCTCCACCTCCGTATGGGGCACCTCATCCATATGCTCCACCTACGTATGGAGCACCTCCTCCAGTTGCACCTTTATCTGTTGGATCTGAAAACCAAGCTGAGGAAAATCCCGTGCCGAAGGAAAAGCGTCCAAAGAGGCTAGAGTGGACGAAGGAAGACGAGGAAAAGCTGGTTAATGCTTGGTTTATGCATTCTAATGATCCCATCTCCGGCAACAATAAGAGCGGATCAAGTTTCTGGGGCCAAATAGCGGCAACATATAACTCCACCTCCGACCCTATCCGTCATCGAACCGCCAAGCAACTTAAAGATCATTGGGTCACCTACAACCGGTTGCGTCAGAGCGGAGCTGACGATGCAATGGTCATGGATGCAGCAATGGCGAGGTTCGAGGGTAAAATGGGGCATCCATTTAAGCGCCATCATTGGTGGCAAGTTGTTCGCCACGAGCCCAAGTGGTCAGCAAAGCATGGTCTTGGTAGTGGATCTGATTCGACTGCGAATAAGAGAACCCGACTCGGAGTCTCTGGTGAATATAGTTCTGGAGGCACTGAAGACACCGAGGAGGAAGTGCCCCGACCAGTGGGGCGTGATAGGGCAAAGGCGGCTGCGCGAAAGACAAAGACGAAGGGGAAAGGGAAGGAAGCCACGAGCAGCGAATCAACAAGTGAAGCATTCAAAATGAAGAACTTGTGGGGTGGATTAGTGAAGGCCAAGCTTTTGAAGCAATGGAACATCCTAAAGGGCCGATCAACCAGAGATATGGACCCGGCTGAAAGACGTACCCATGGCAGGGCCGTAAAGATGGTCGAAAAAGAACTTGGTCTGCTAGATGACGAAGAAGAGGAACCGGAAGCGGAACGTGAAGAGGAGGAAGATGAGGATGAGATCGAGGAGTCCGATTAG
MVMDAAMARFEGKMGHPFKRHHWWQVVRHEPKWSAKHGLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGRDRA
KAAARKTKTKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQWNILKGRSTRDMDPAERRTHGRAVKMVEKELGLLDDE
EEEPEAEREEEEDEDEIEESD
CCCTATCCGTCATCGAACCGCCAAG...
CCCTATCCGTCATCGAACCGCCAAGCAACTTAAAGATCATTGGGTCACCTACAACCGGTAGGTGACCAAGTTCAATGGATTCTACCTCCAAGAAAAAAGGTTGCGTCAGAGCGGAGCTGACGATGCAATGGTCATGGATGCAGCAATGGCGAGGTTCGAGGGTAAAATGGGGCATCCATTTAAGCGCCATCATTGGTGGCAAGTTGTTCGCCACGAGCCCAAGTGGTCAGCAAAGCATGGTCTTGGTAGTGGATCTGATTCGACTGCGAATAAGAGAACCCGACTCGGAGTCTCTGGTGAATATAGTTCTGGAGGCACTGAAGACACCGAGGAGGAAGTGCCCCGACCAGTGGGGCGTGATAGGGCAAAGGCGGCTGCGCGAAAGACAAAGACGAAGGGGAAAGGGAAGGAAGCCACGAGCAGCGAATCAACAAGTGAAGCATTCAAAATGAAGAACTTGTGGGGTGGATTAGTGAAGGCCAAGCTTTTGAAGCAATGGAACATCCTAAAGGGCCGATCAACCAGAGATATGGACCCGGCTGAAAGACGTACCCATGGCAGGGCCGTAAAGATGGTCGAAAAAGAACTTGGTCTGCTAGATGACGAAGAAGAGGAACCGGAAGCGGAACGTGAAGAGGAGGAAGATGAGGATGAGATCGAGGAGTCCGATTAGAGTTATGTAATTTTATTTTAATTATCA
MDEVPHTEVEHMEHKEVLHTEVEHMKEGHMEVSGKKLDFRPQQVEEGHTDVPGMRLEFRLGKLEVDHMKTVDIDTNDRDK
GMVVDAQPEIVHGGVRLKHRSDDVVKKTHLTEGL
ATGGATGAGGTGCCCCATACGGAGG...
ATGGATGAGGTGCCCCATACGGAGGTGGAGCATATGGAGCATAAGGAGGTACTCCATACGGAGGTGGAGCATATGAAGGAGGGGCATATGGAGGTATCTGGAAAGAAGCTTGACTTCCGTCCGCAGCAGGTGGAGGAGGGGCATACGGACGTACCGGGAATGAGGCTTGAATTCCGGCTTGGGAAGTTGGAGGTTGACCATATGAAGACGGTGGATATTGATACAAATGATAGGGATAAGGGTATGGTGGTGGACGCGCAGCCGGAAATAGTGCACGGGGGAGTGAGGCTGAAACATCGGAGCGACGATGTAGTGAAGAAGACTCATCTAACGGAAGGGTTGTAG
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